| Tool | Name of Tool | Publications | Google Scholar Citations |
|---|---|---|---|
 |
BiGG Models | Nucleic Acids Res. 2015 Bionformatics 2010 |
726 |
 |
Cytoscape | Genome Research 2003 | 13,636 |
 |
Dual-CRISPR Screen Analysis Pipeline | Nature 2017 | 94 |
 |
Emperor | Gigascience 2013 | 440 |
 |
ESCHER | PLoS Computational 2015 | 94 |
 |
Flye | Nature Biotechnology 2019 | 9 |
 |
GenePattern | Nature Genetics 2006 | 1,513 |
 |
GNPS | Nature Biotechnology 2016 | 426 |
 |
'ili | Nature Protocols 2018 | 13 |
 |
KeLP (Kernel Lattice Parallelism) | Journal of Parallel and Distributed Computing 1998 | 94 |
 |
MASS Toolbox | Nature Biotechnology 2016 | 426 |
 |
Mass Spectrometry Interactive Virtual Environment |
Unpublished (massive.ucsd.edu) | 686 |
 |
NDEx | Cell Systems 2015 Bioinformatics 2017 Cancer Research 2017 |
89 |
 |
The Cobra Toolbox | Nature Genetics 2005 | 1,513 |
 |
Qiime | Nature Methods 2010 | 14,481 |
 |
Qiime2 | PeerJ Preprints 2018 | 183 |
 |
Qiita | Nature Methods 2018 | 194 |
 |
SPAde | J Comput BioL 2012 | 5,820 |
 |
metaSPAde | Genome Res 2017 | 277 |
| TOTAL GOOGLE SCHOLAR CITATIONS | 40,909 | ||
Last Updated: May 13, 2019
